Installation

voluba-mriwarp is designed as a Windows application but can also be executed on Linux.

Windows 10 or higher

Install voluba-mriwarp

Download the installer here.
Run the installer.
Run voluba-mriwarp directly from the installer. Depending on the installation settings you have chosen, you can also run voluba-mriwarp from the installation directory, the start menu or the desktop shortcut.

Uninstall voluba-mriwarp

Run Uninstall from the installation directory or the voluba-mriwarp folder in your start menu, depending on the installation settings that you chose. If you wish to delete the default output folder, delete voluba-mriwarp from your home directory. Note that this may remove warping results.

Hint

The default installation directory is C:\Users\your_username\AppData\Local\voluba-mriwarp.

Linux

Requirements

Python 3.8 or higher
ANTs Eotapinoma

Install voluba-mriwarp

Install all requirements.

Clone voluba-mriwarp from GitHub:

git clone https://github.com/FZJ-INM1-BDA/voluba-mriwarp.git

Install all Python requirements with pip:

cd voluba-mriwarp
pip install scikit-build
pip install -r requirements.txt

Run voluba-mriwarp:
```
python3 start_app.py
```

Warning

If you run voluba-mriwarp via Python on Windows, you need to change all "/" in HD_BET.utils.maybe_mkdir_p to "\\".

Uninstall voluba-mriwarp

Delete voluba-mriwarp from the installation directory. If you wish to delete the default output folder, delete voluba-mriwarp from your home directory. Note that this may remove warping results.